Problems photographing flies. 2. To stack or not to stack?

female Aenigmatias

As I showed in the last post, at high magnifications you can only have a small amount of your subject in the sharpest focus because diffraction limits useable depth of field. Now you have two choices: stacking or settling for some different compromise.

The image above is a blended stack of 25 images, all of which only have a bit of the fly in focus. I used a program called Zerene Stacker to do this, but there are other options. You can make some phenomenal images this way (just look at the forums at www.photomacrography.net), especially using tens to hundreds of source images, but there is a catch – your subjects have to be motionless, preferably dead. Some field photographers can get short stacks of a few images of resting flies, but generally flies are 2. active. For me, it is better to pick a compromise lens setting like f 8-11, as discussed last time, to get good shots of lively, moving flies. If you want more information on stacking, though, see the free resources at www.macrostop.com.

Next: how do you get enough light to use f 11?

Problems photographing flies. 1. Of what is your camera capable?

A tachinid fly - looks good, right?

Flies are fantastic subjects for photography, but they present many challenges because they are

1. small,

2.active,

3. often metallic and bristly.

All of these are factors that cause problems that I’ll discuss in the next few postings.

[The reason I’m writing about this is that there is so little good macrophotography information about insects like flies. I assume interested readers know the basics of 35 mm digital photography. If this subject doesn’t grab you, go back and re-read the last post by Lisa Gonzalez, which was a real crowd-pleaser]

When you photograph small things at high magnification, your depth of field is frighteningly shallow. Take a shot at f 1.4 and you’ll get maybe one tarsomere and a wingtip in focus. The rest will be a blur. Therefore, you need  to close down to f 22 or f 32 to get everything in focus- correct? Unfortunately, when you do this, you start to distort the image through diffraction. It’s not really a problem when photographing big things (like landscapes), but flies are 1. small.

Above is a good-sized tachinid fly. I photographed it with my camera (Nikon D-7000) on a tripod, using a 125 mm macro lens set at f 22. At this magnification it looks pretty sharp, but look closer (below). You’ll softness from diffraction that no fly obsessed photographer (and I hope you are one) would tolerate. And since most flies are smaller than this tachinid, what we see in this magnified view is ALL we’ll get.

f 22 -blech!

At the next setting, f 16, sharpness is definitely better. Scroll down to see other settings.

f 16, a little better

f 11, better yet

f8 - sharp

f 5.6 - who knew?

The problem, of course, is that by f 5.6 the legs are all out of focus. You have to pick a compromise (f 11 works for me) or do something else, photostacking, which only works well with stationary objects (and remember, flies are 2. active). More compromises are ahead.

To get the best results, you first need to know what your camera can do. Everyone needs to test their camera and lenses this way to see what is possible. Then you can move on too what is practical.

Next- how do you get to use that f 11 setting?

Keep your eyes on the flies

[This is a guest post by Lisa Gonzalez, one of my field team members.]

Lisa Gonzalez in demonstration mode

Lisa Gonzalez in demonstration mode

Last week I had the incredible honor of joining a small team that included Wendy, a parataxonomist; Inna, a scientific illustrator and videographer; and Kat, an accomplished amateur photographer; under the guidance of the respected Dipterist Dr. Brian Brown, to the lush lowland tropics of Costa Rica on a phorid fly foraging expedition. Our goal was to record and observe parasitic phorid fly behavior– in particular to begin unraveling the mysteries surrounding certain phorid flies in the genera Apocephalus and Dohrniphora— as well as collecting any specimens that struck our interest.

My first trip to this beautiful, magical country was 10 years ago, but every day that has gone by since has been a day that I have anticipated returning. So suffice it to say I was beyond excited at the prospect of spending entire days under the forest canopy, scanning the ground and leaves for parasitic phorids and their specific hosts.

People who know me know that my passion for insects runs deep, but I still get an occasional incredulous glance, a slightly furrowed brow or a polite smile and shrug from my non-entomologist friends as I explain that the vast majority of our trip will be dedicated to looking for 3 mm sized flies (even though they know it is part of a scientific project, as in, WORK.) No zip lines, no sipping mango margaritas on the beach –sugar on the rim, hold the salt!– no waiting for a quetzal to fly by for that perfect photo op.

No, my friends, we will be looking for flies, cool parasitic ones, because they are out there, lurking in the jungle, waiting for someone to observe them doing things that are infinitely more fascinating to me than the showiest toucan or the noisiest oropendola. Somebody needs to give them the attention they deserve!

After a morning cup of that fine, fine Costa Rican coffee, we used the help of the phorid flies themselves, namely their incredible ability to detect the alarm pheromones of their hosts. We searched the tree trunks and undergrowth for the specific types of ants that serve as the hosts (Odontomachus sp. and Paraponera clavata in this case) so that we could collect them, crush them, and thus attract the flies we so anxiously sought, a technique that Brian serendipitously but no less ingeniously discovered 20 years ago.

As the flies started to hone in on the chemicals released by the distressed ants, I felt myself becoming completely entranced by the miniature drama unfolding at my feet. This is the point where I struggle to find my mental middle zone, maintaining a focus on the flies while not becoming too tunnel-visioned; still being aware of my surroundings since, after all, we are in a jungle with stinging ants and wasps everywhere, and an occasional venomous snake, but most importantly, not wanting to miss any phorid action on the sidelines.

Keeping your eyes on the flies and not being distracted by bedazzling morphos or adorable sloths (my goodness, they ARE cute!) reaps great rewards for anyone with even a modest interest in animal biology and biodiversity. For an entomologist, or those willing to scale down their perspective and peer into the microcosmos, it is a truly awesome experience to see a minute female fly risk her own life by attacking an ant at least twice her size, desperately needing a place to lay her egg (or eggs), using a variety of bodily tools, such as ovipositors shaped like sabers or mouthparts serrated like knives. These females are so alert and nimble, like little ninjas, and although the outcome of their efforts, which results in decapitation or an “‘Alien’ chest burster” style host death depending on the phorid species, may seem cruel to our human sensibilities, I see a brave and resilient mother struggling to care for her young (that’s a whole lot of anthropormorphism for one sentence, I know!)

Brian decided to expand our efforts in the field on this trip by collecting female phorids and hosts and observing them in captivity in our make shift lab. He very generously put me in charge of this part of the project, proclaiming that I am “good at keeping bugs alive” from my years spent as the museum’s insect zoo technician, a professional extension of the top secret insectary I kept in my closet when I still lived with my parents many years ago. After several days of working out humidity issues, adding extra masking tape for the sneaky escape artists, and trying to provide a stress free environment for the flies to “go about their business,” we were able to observe some provocative behavior in captivity. Some preliminary work was done with the species Dohrniphora conlanorum, and we successfully reared larvae of Apocephalus paraponerae. I was alone in the lab when I first spied the chubby little bundles of maggot-y joy in the abdominal cavity of the Paraponera ants, and in my solitude was able to get up and do my celebratory maggot dance without shame. The pure excitement over seeing a world that most people rarely stop to notice, the thrill of something new on the other end of your scope, is greater than a million zip line adrenaline rushes or brain-in-a-jacuzzi delicious tropical rum buzzes to me. I am so elated to have been a part of this project, and I hope you enjoyed my attempt to briefly describe that elation. Now to start counting the days until I return once more…

Army ant raid of my dreams

I suppose most people have anxiety dreams, in which things are going horribly wrong because, in their dreams, they are late, lost, without something vital, or otherwise unable to figure out what’s going on. Being an entomological geek, and obsessed with field work, my anxiety dreams are often centered around being in a great tropical place, surrounded by social insects like ants and bees, but not having collecting equipment, having to leave, rain starting, and so on. I wake up frustrated, hoping that next time I’m in the tropics none of these things happened to me.

A couple of days ago, we pulled off the road in an area known to the locals as “Bambu de Suerre” and walked on a short rocky path into the forest. We were collecting for a while at a nest of Pheidole ants, when I decided to walk further up the trail. I started to hear the sound of the distinctive ant birds that follow army ant raids, and sure enough came across a massive raid of Labidus praedator.

[wpvideo Q6qGyMey]

Associated with these ants was a huge assortment of flies, in incredible numbers. Clouds of tachinids and conopids (Stylogaster) were buzzing around the undergrowth, while closer inspection showed that there were equivalent masses of phorid flies a few millimeters above the ground, attacking the ants. We were collecting 5 or 6 flies per aspirator attempt without even looking, just waving her aspirator is blindly around the ants and sucking in air. We collected hundreds of flies, truly an amazing event, and one I have rarely been lucky enough to stumble upon.

a small part of our fly catch

The flies included several species of Apocephalus ant decapitating flies, with the most common being A. praedator. As well, we collected some highly host-specific phorid genera like Cremersia that are associated strictly with non-Eciton army ants. One of the amazing things about Cremersia is that their ovipositors are complicated and asymmetrical. We don’t know how they use them, but they are so unusual that the females were originally described as males!

female Cremersia

Today is our last field day for this trip. There is still time for another dream to come true.

In Costa Rica with bloodsuckers

Being in the field, it is hard to ignore the biting flies. Mosquitoes, black flies, horse flies, sand flies, and no-see-ums all make their mark. Sometimes I forget, however, that humans are not the only recipients of their unwanted attention. For example, my good friend Dr. Art Borkent studies a group of flies called the Corethrellidae, whose mosquito-like females feed on frogs and are attracted to frog calls. But Art’s main study group are the aforementioned no-see-ums, technically known as Ceratopogonidae. The many species of these minute flies have differing ways of life, as some are predators of other insects, some are misery inducing biters of vertebrates (especially on beaches, where they can clear the humans out during certain times of day), and surprisingly, some feed on the “blood” (haemolymph) of other insects.

We saw a spectacular example of this yesterday here in Costa Rica. We took a day trip to a spot called Las Minas, where we were looking (mostly unsuccessfully) for different ant-decapitating flies. While searching around, Wendy Porras, our Costa Rican colleague, found a katydid with something strange on it. Being an excellent field biologist, Wendy immediately recognized that this white, almost pea-sized attachment to the katydid’s abdomen was a swollen female ceratopogonid, full of eggs.

ceratopogonid on katydid's back

I hope Art will forgive me, but I didn’t collect the specimen. I got distracted by other things, and by the time I thought of it, the fly had already left. This is a case of bad field work on my part. Certainly when significantly unusual things are seen, they should be collected so that the specimens accompany the life history observations. Hopefully we can make up for it with even more significant observations on the phorid flies that we came here to study.

closeup of the fly

[Thanks to A. Borkent for a couple of corrections to the original post]

New frontiers in Costa Rica

Tapanti NP

My late colleague, the hymenopterist Roy Snelling, used to ask me disdainfully, “why go to Costa Rica; everything is already known from there.” Even Roy knew, however, that this wasn’t true. His mistaken assertion was that so many people had collected in CR that, given the large number of other places that had not received any attention, it would be a waste of time to go back to a small Central American country.

I disagreed with his statement for many reasons. First of all, there aren’t enough dipterists on the planet to make even a tiny part of CR “overcollected.” There are so many habitats and microenvironments in a country with a mountain range down its center in the tropical zone, that doing an inventory of all of Costa Rica is probably impossible. From dry tropical forest in the northwest to the near treeline heights of the Cerro de la Muerte, and all the rain forest inbetween, CR is a biodiversity paradise.

But more interestingly, it is possible to find new frontiers in the same sites by using different collecting techniques. Last year, for some reason, we decided to try blacklight collecting in Costa Rica for the first time since my trips in the 1980s. We used a trap of my design that was so successful, I decided to write it up for publication (watch for it in Entomological News).

Using this “old” technique again, we managed to wring out some incredible specimens of Phoridae and one special sphaerocerid from a mid-elevation site from which we otherwise had no special expectations.

For phorids, our technique yielded new specimens and a new species of a genus previously known from only a couple of females from elsewhere in Costa Rica. This genus is marked by incredible huge palps with outrageously long apical setae. Additionally, we got some parasitic phorids I had never seen before, as if we had gone to an entirely new continent. Believe me, I have gone through hundreds of samples Costa Rica, and have looked at least 50,000 specimens from this country, so when I see a congregation of new things, I take notice.

the phorid with huge palps - a fuzzy photo

The sphaerocerid was the second known specimen and species of the genus Podiomitra of the incredibly rare subfamily Homalomitrinae. Although I’m not an expert on these flies, I knew as soon as I saw it that it was something special.

Podiomitra sp.

Bottom line: we have to keep trying new collecting methods, even if they are old collecting methods. I’m going back to Costa Rica at the end of February, and I’ll be bringing my lights again!

How we started working on “rare” bee-killing flies

The most beautiful phorid flies are in the genus Melaloncha, also known as bee killing flies. I have no small bias in this statement, however, since I worked on them for several years and grew to be very fond of them.

Melaloncha punctifrons, female

One of the allures of these flies was their rarity when I first started. In all of the collections I surveyed, I could find only a few specimens, about 100 in total. There were many new species among these specimens, however, so I knew that the 32 described species was only the tip of the iceberg. But how was I to uncover the rest of that iceberg?

Many parasitic phorid flies seem to be attracted to masses of their hosts. Logically, aggregations of hosts should create aggregations of parasitoids, so Giar-Ann Kung and I decided to try to make aggregations of stingless bees, the known hosts of these flies. Monty Wood, a fellow dipterist who works on tachinid flies, told me that when he sprayed a mixture of honey, Coca-Cola, and water onto undergrowth vegetation in an attempt to attract his flies often attracted huge aggregations of stingless bees instead. Therefore we tried spraying honey and water, and were almost immediately successful in attracting bees, and eventually flies. There was one other required condition, however: it had to be in the sunlight, or the flies would not be attracted. This is contrary to most phorids, which tend to be more active in shade.

Melaloncha acoma attacking stingless bee

Once we adopted the honey spray and sunlight combination, we started collecting large numbers of these flies, eventually collecting thousands of them. Sometimes, we were almost too successful in attracting the bees, producing gigantic aggregations that made it impossible to breathe or see anything, necessitating the use of jury rigged bee veils. These consisted of an insect net placed over the head and sealed around the neck with rubber bands. Eventually, though, the tiny stingless bees would get in, and we’d have to beat a retreat to get the annoying things out of our eyes, ears, and noses.

Me wearing a jury-rigged "bee veil" in Argentina, 2003

It was all worth it though, as we ended up catching 50-100 Melalonchaper day at good sites, and found almost 150 new species. I think there are still many more out there to find, so we keep spraying honey wherever we go in the tropics, and keep finding the beautiful, but deadly (to bees) bee-killing flies.

Melaloncha xanthocauda, femal

Melaloncha berezovskiyi, female

Melaloncha acoma, female

Take your watch to the field

I am sure it makes perfect sense to bring your watch into the field to keep track of the time. That is not why I am advocating this practice, however. A watch once helped us make an important new observation on bee parasitizing flies in the tropics.

One unavoidable fact of tropical fieldwork is that you will stink. You sweat your clothes out within the first 10 minutes after breakfast, and remain damp and moldy all day until you hit the showers. It is impossible to wear clothes for more than one day without them getting rank and disgusting. You can either bring enough clothes to change all of them every day, do lots of laundry during the trip, or resign yourself to having some of your clothes remain not suitable for indoors and fine dining.

Things that you wear or sweat on day after day buildup in particular fragrance. For instance, my collecting bag is always covered with butterflies in the field, probably because they mistake it for a piece of carrion. Other items can be the same way.

My collecting bag swarming with bees, flies, and butterflies. It stank.

In 2001, Giar-Ann Kung and I were in Colombia with some colleagues, and it was incredibly hot and humid. We were after bee killing flies of the genus Melaloncha, which we were trying to attract with honey. Placing honey on the undergrowth attracts large numbers of bees, and once we had large numbers of bees, we hoped that the parasites would arrive as well. Problem was, it wasn’t working. The bees were much more attracted to Giar-Ann’s watch, which really stank. She took it off and put it on sheet that we had placed in the field and the bees visited it avidly. Suddenly, against the black background of the watch, Giar-Ann noticed a tiny yellow shape curling its abdomen and running towards tiny bees. She collected the fly and showed it to me – it was a female Styletta crocea, a rarely collected species whose lifestyle was completely unknown. I doubt if we would ever have seen the fly without the black watch in the background. Later, we collected Melaloncha specimens, but that Styletta was our first big break of the bee parasite project.

female Styletta crocea

It never ceases to amaze me how events unfold during a research program or field trip. No matter how much you prepare, invariably which you thought would work doesn’t, but something completely different appears or is found. It’s part of the reason why fieldwork and research remain compelling and exciting for those of us who aspire to make new discoveries.

A living fossil from South America

Vladimir and I sorting in the field

Hard-core dipterists know all about Sciadocera, the Australian and New Zealand fly that seems to bridge the gap between platypezids and phorids. It was immortalized by the drawing Harold Oldroyd included in his 1964 book “The Natural History of Flies” which was entitled “the most wonderful fly in the world”.

Less known is the New World species, found in South Chile and Argentina. Called Archiphora patagonica, this species is similar, but smaller than Sciadocera, and more brown in color. Hennig described a second species of Archiphora from Baltic amber, and declared that genus to have been once widespread, and now relictual in the southern hemisphere. A few years ago, I re-examined the Baltic amber fossil and showed it was probably not congeneric with A. patagonica. There are, however, three species of Baltic amber Sciadocerinae (the group is now considered part of the Phoridae), and others possibly from older amber, so it is reasonable to refer to the two living species as “living fossils”.

Elvia and Vladimir getting discouraged


I needed to collect fresh specimens of Archiphora patagonicafor a molecular project in which Dr. Paul Smith and I are trying to understand the phylogeny of phorid flies using DNA sequences. A couple of years ago, I went to southern Chile with two assistants: my old friends Vladimir Berezovskiy from here in Los Angeles and Elvia Zumbado from Costa Rica. Together, we spent three weeks scouring the forests looking for this fly. We ran Malaise traps in sites where Canadian hymenopterist Masner collected some in the 1980s, with no luck (we knew we weren’t catching them because we sorted the samples in the field, looking for the flies). Since Masner also did a lot of sweeping, we swept for hours in forest undergrowth, dumping our net contents in a bowl of soapy water and searching for the elusive flies. In a fit of inspired desperation, Vladimir even grew a beard like Masner’s to try to appease the phorid gods. We collected at a number of sites on the mainland, as well as on Chiloe Island, where we found most of the forests that Masner collected in to be gone. We even looked up the former farm of Chilean entomologist Luis Peña, where the remains of his field station still exist, and swept there extensively. We got a lot of interesting phorids, but no Archiphora patagonica.

Peña's farm

At least, that’s what we thought until we got home. When I went to the samples with a microscope, I was elated to find a single male specimen from Peña’s old farm that eluded our field sorting. Although we eventually ground the specimen up for sequencing, we took some nice photos of this fly, which show that it too is one of the “most wonderful flies in the world.”

our single Archiphora specimen

Brazil expedition 6 – Smoke

One of the weirdest happenings on our trip occurred on the way back to Porto Velho. As we were driving along, I saw a smoldering pile of wood and trash along the road. “Let’s stop and try for Microsania” I suggested. Everyone was hot and tired, the site was far from any good habitat, and it was about to pour rain, but Dalton good-naturedly indulged my request. I jumped out of the car, ran over to the smoking pile with a borrowed net, took a few sweeps, and beat a hasty retreat to the car (it was terribly hot from the fire), where everyone else looked at me skeptically.

Me collecting Microsania in smoke

“I got some,” I said. “Those were already in the net,” someone suggested. But no, they were “smoke flies,” species of the platypezid genus Microsania. Most were males, as they assemble mating swarms in smoke- nobody really knows why. Smoke flies are known from around the world, but remain rare in collections, only because we rarely bother to sweep in smoke! At any rate, we caught a lot of them that day.

male Microsania

This concludes my reports from Brazil. It was a productive trip, but the heat, mosquitoes, and travel made things fairly tough. Also, one member of our group got stung in the stomach by a big wasp and had to be rushed to the hospital due to a bad allergic reaction. The forest is going fast, but there are still large areas to explore and discover. I can’t wait to go back there.

Note: all specimens we collected in Brazil are deposited in the Zoology Museum of the University of Sao Paulo.

forest destruction